In the end, everything falls to chaos. A new mare has escaped her prison in Tartarus, and has kept her grudge against Equestria. With her return, she threatens the very fabric of Time and Space itself. In New Equestria, foes will unite to beat this unbeatable foe... but at what cost?
It's been three months since the Noble Six rescued the Mane Six from Chaos Mountain and even though Flare knows a decent amount about friendship, his adventure is still far from over. Flare has yet to know who the mysterious doctor is because there is somepony out there that wants to ruin Flare's life for good. Who could it be? Meanwhile, Flare's sister Water Gun moves into town.
As the war between humans and clockponies waged, Tornadic Wind worked on his latest training simulator. Nicknamed 'The Program', Tornadic entered the video game-like digiverse and began his training, where he would meet an old friend. A friend he hasn't seen since he was a cub on Earth.
When Tornadic stumbled upon a Changeling in Ghastly Gorge, he discovered something about them that could change Equestria forever. So when he brought the topic up during a Royal Hearing, many arguments broke out, ending with Tornadic resigning from his seat of Ruler of Equestria. Now labeled as a traitor, Tornadic takes his weapons and heads off to the Changeling Kingdom. The widow, Princess Twilight, sends forces to the Kingdom with one purpose, to destroy everything in sight. Will Tornadic be able to make alliance so great, peace can fall upon both races, or will he die trying?
The lost Prince of Equestria has returned, but he's is not the only pony that has returned. The legendary Freemareson's have arisen and Equestria is threatened to lose everything if not stopped. Not only that, the Prince is stressed that his subjects won't accept him. With visions of an apocalyptic future in his dreams, can the newly crowned Prince protect everypony he loves?
Soarin has had about enough of Spitfire's attitude and decides to take a flight to clear his head. Until his nose leads him to the doorstep of a certain timid Pegasus.
With Darkfire's return, everything can go wrong. Is Tornadic going to be able to stop his brother from, once again, destroying Equestria?
After the Freemareson/ Clockpony War, Equestria was left a barren wasteland. Clockwork has taken control of Equestria and its citizens. He not only slaughtered thousands of ponies, he also reanimated them into his Clockpony Army. Although four ponies escaped with their lives, they were faced with a difficult challenge of controlling the chaos in the human world. With the impending doom of losing the human world to his father, the newly born hybrid Prince of Equestria is face to face with the decision of choosing whether to kill his father for the sake of equestria or to join his father and his Clockpony Army.
The staff of NPR's comedy news program Wait Wait, don't Tell Me! make Ponyville the next stop for their show. Craziness ensues as the show's two host, Peter Seagall and Carl Cassel, deal with the antics of the multi-colored, hyperactive ponies, along with learning to deal with a new assistant, a stallion by the name of Minton Horesefeathers. Features a special guest appearance by Spike and mentions of Discord and Chief Thunderhooves.
After a strange incident, a drafter from New York named Eli and 4 shady Number hunters arrive in Equestria around the same time as the members of Lamss, who are visiting Equestria to compete in the 3rd annual EFDC. When the others learn of Eli's true identity, it's up to him, the members of Lamss, and their pony friends to stop the Number hunters from stealing all of the precious Numbers. However, something more sinister surfaces that threatens all of Equestria...